P 1.01
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P 1.02
|
Gene expression and TMB of MSI-H and POLE mutation by colorectal cancer
Poster
Computational RNA biology
K. Kluck
Presenter
Institute of Pathology, University Hospital HeidelbergM. von Winterfeld Institute of Pathology, University Hospital HeidelbergM. Kirchner Institute of Pathology, University Hospital HeidelbergP. Schirmacher Institute of Pathology, University Hospital HeidelbergA. Stenzinger Institute of Pathology, University Hospital HeidelbergJ. Budczies Institute of Pathology, University Hospital Heidelberg
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P 1.03
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P 1.04
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P 1.05
|
Identifying gene signatures: purely data-driven approaches in analysis of the transcriptomic data and its implementation in immunological analysis
Poster
Computational RNA biology
B. Liu
Presenter
German Center for Lung Research, partner site Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Hannover Medical SchoolP. Lindner Leibniz University of HannoverA. Jirmo Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical SchoolU. Maus Division of Experimental Pneumology, Hannover Medical SchoolT. Illig Hannover Unified Biobank, Hannover Medical SchoolD. DeLuca German Center for Lung Research, partner site Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Hannover Medical School
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P 1.06
|
Decoding Nanopore Signals with Neural Networks for Cell Type-Specific Expression Profiling
Poster
Computational RNA biology
T. Baar
Presenter
Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of CologneM. Ignarski Dept. II of Internal Medicine and Center for Molecular Medicine Cologne, University of CologneS. Dümcke Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of CologneI. Helmuth Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzJ. Hertler Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzM. Helm Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzR. Müller Dept. II of Internal Medicine and Center for Molecular Medicine Cologne, University of CologneA. Tresch Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of Cologne
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P 1.07
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P 1.08
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P 1.09
|
A combined computational pipeline to detect circular RNAs in human cancer cells under hypoxic stress
Poster
Computational RNA biology
A. Di Liddo
Presenter
Buchmann Institute for Molecular Life Sciences and Institute of Cell Biology and Neuroscience, Goethe UniversityC. Oliveira Freitas Machado Institute of Cell Biology and Neuroscience and Institute for Cardiovascular Regeneration, Goethe UniversityS. Fischer Department of Biology, Technical University DarmstadtS. Ebersberger Institute of Molecular Biology (IMB)A. Heumüller Institute for Cardiovascular Regeneration, Goethe UniversityJ. Weigand Department of Biology, Technical University DarmstadtM. Müller-McNicoll Institute of Cell Biology and Neuroscience, Goethe UniversityK. Zarnack Buchmann Institute for Molecular Life Sciences, Goethe University
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P 1.10
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P 1.11
|
The HEK-SeqOme – A comparison of multiple RNA-Seq libraries
Poster
Computational RNA biology
A. Muller
Presenter
Luxembourg Institute of HealthN. Nicot Luxembourg Institute of HealthE. Mommaerts Luxembourg Institute of HealthF. Azuaje Luxembourg Institute of HealthG. Dittmar Luxembourg Institute of Health
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P 1.12
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P 1.13
|
Baltica: Benchmarking alternative splicing identification
Poster
Computational RNA biology
T. Britto-Borges
Presenter
Heidelberg University HospitalV. Boehm University of CologneJ. V. Gerbracht University of CologneN. H. Gehring University of CologneC. Dieterich Heidelberg University Hospital
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P 1.14
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P 1.15
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P 1.16
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P 1.17
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P 2.01
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P 2.02
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P 2.03
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P 2.04
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P 2.05
|
The definition of open reading frame revisited
Poster
Genomics
P. Sieber
Presenter
Department of Bioinformatics, Friedrich Schiller Universität JenaM. Platzer Leibniz Institute on Aging – Fritz Lipmann Institute (FLI)S. Schuster Department of Bioinformatics, Friedrich Schiller University Jena
|
P 2.06
|
Optimizing panel sequencing estimates for tumor mutational burden (TMB) measurement
Poster
Genomics
J. Budczies
Presenter
Heidelberg University HospitalE. Rempel Heidelberg University HospitalK. Kluck Heidelberg University HospitalD. Kazdal Heidelberg University HospitalM. Allgäuer Heidelberg University HospitalV. Endris Heidelberg University HospitalP. Schirmacher Heidelberg University HospitalA. Stenzinger Heidelberg University Hospital
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P 2.07
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|
P 2.08
|
MiCroM: A Comprehensive Pipeline for Gene Amplicon and Metagenomic Data Analysis
Poster
Genomics
R. Bharti
Presenter
Bioinformatics, TUM Campus Straubing for Biotechnology and Sustainability,Weihenstephan-Triesdorf University of Applied Sciences, Straubing, GermanyD. Grimm Bioinformatics, TUM Campus Straubing for Biotechnology and Sustainability,Weihenstephan-Triesdorf University of Applied Sciences, Straubing, Germany
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P 2.09
|
|
P 2.10
|
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P 2.11
|
ClinVAP: A Reporting strategy from variants to therapeutic targets
Poster
Genomics
B. Sürün
Presenter
University of TübingenC. Schärfe University of TübingenM. Divine University of TübingenJ. Heinrich University of TübingenN. Toussaint ETH Zurich & Swiss Institute of BioinformaticsL. Zimmermann University of TübingenJ. Beha University Hospital TübingenO. Kohlbacher University of Tübingen
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P 2.12
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P 2.13
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P 2.14
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P 2.15
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P 2.16
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P 2.17
|
Omics Profiling and integration: Deeper insight into Pancreatic Ductal Adenocarcinoma (PDAC) survival heterogeneity using integrative analyses of individual and global transcriptome based networks
Poster
Genomics
A. Bhardwaj
Presenter
BIO3, GIGA Research, University of Liège, BelgiumC. Josse Laboratory of Human Genetics, GIGA Research, University Hospital (CHU), Liège, BelgiumC. Poulet Laboratory of Human Genetics, GIGA Research, University Hospital (CHU), Liège, BelgiumD. Van Daele Department of Gastro-enterology, University Hospital (CHU), Liège, BelgiumM. Chavez University of LiegeI. Struman GIGA-R Centre, Laboratory of Molecular Angiogenesis, Liège, BelgiumK. Van Steen BIO3, GIGA Research, University of Liège, Belgium
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P 2.18
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P 2.19
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P 2.20
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P 2.21
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P 2.22
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P 2.23
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P 2.25
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P 2.26
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P 2.27
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P 2.28
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P 2.29
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P 2.30
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P 3.01
|
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P 3.02
|
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P 3.03
|
Automated cell type gating on Chip cytometry-data
Poster
Medical Informatics
S. Gaedcke
Presenter
Medizinische Hochschule Hannover (MHH)A. Jirmo Medizinische Hochschule Hannover (MHH)D. DeLuca Medizinische Hochschule Hannover (MHH)C. Happle Medizinische Hochschule Hannover (MHH)A. Dittrich Medizinische Hochschule Hannover (MHH)G. Hansen Medizinische Hochschule Hannover (MHH)
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P 3.04
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P 3.05
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P 3.06
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P 3.07
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P 5.01
|
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P 5.02
|
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P 6.01
|
Single-Cell RNA Sequencing Uncovers a Large-Oncosome-Signature in Medulloblastoma
Poster
Single Cell Assays
M. Interlandi
Presenter
Institute of Medical Informatics – University HospitalT. Albert Department of Pediatric Hematology and Oncology - University Children's HospitalK. Kerl Department of Pediatric Hematology and Oncology - University Children's HospitalM. Dugas Institute of Medical Informatics – University Hospital
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P 6.02
|
GCB2019: Single-cell RNA analysis in Galaxy
Poster
Single Cell Assays
M. Tekman
Presenter
Albert-Ludwigs-Universität Freiburg, Institut für InformatikB. Batut Albert-Ludwigs-Universität Freiburg, Institut für InformatikB. Grüning Albert-Ludwigs-Universität Freiburg, Institut für Informatik
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P 6.03
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P 6.04
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P 6.05
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P 7.01
|
How to “appreci8” Variant Calling in NGS Data
Poster
Others
S. Sandmann Westfälische Wilhelms-Universität Münster, Institut für Medizinische InformatikM. Dugas Westfälische Wilhelms-Universität Münster, Institut für Medizinische InformatikM. Interlandi
Presenter
Institute of Medical Informatics, Münster
|
P 7.02
|
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P 7.03
|
ExtraCytoplasmic Function (ECF) sigma factor classification: from phylogenesis to protein regulation
Poster
Others
D. Casas Pastor
Presenter
LOEWE-Zentrum für Synthetische Mikrobiologie (Synmikro)S. Chandrashekar Iyer Max Planck Institute for Terrestrial MicrobiologyR. Müller Justus-Liebig-Universität GießenT. Mascher Technische Universität DresdenA. Goesmann Justus-Liebig-Universität GießenS. Ringgaard Max Planck Institute for Terrestrial MicrobiologyG. Fritz LOEWE-Zentrum für Synthetische Mikrobiologie (Synmikro)
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P 7.04
|
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P 7.05
|
HiCExplorer 3: A toolbox for Hi-C data analysis
Poster
Others
J. Wolff
Presenter
Albert-Ludwigs-University FreiburgL. Rabbani Max-Planck-Institut für Immunbiologie und EpigenetikG. Richard Max-Planck-Institut für Immunbiologie und EpigenetikT. Manke Max-Planck-Institut für Immunbiologie und EpigenetikA. Akhtar Max-Planck-Institut für Immunbiologie und EpigenetikR. Backofen Albert-Ludwigs-University FreiburgF. Ramirez Target Discovery Research, Boehringer Ingelheim Pharma GmbH & Co. KGB. Gruening Albert-Ludwigs-University Freiburg
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P 7.06
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P 7.07
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P 7.08
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P 7.09
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P 7.10
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P 7.11
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P 7.12
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P 7.13
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P 7.14
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P 7.15
|
A comparative study of MiSeq and MinION for the classification of 16S rRNA gene sequences
Poster
Others
R. Winand
Presenter
Transversal & Applied Genomics, SciensanoB. Bogaerts Transversal & Applied Genomics, SciensanoQ. Fu Transversal & Applied Genomics, SciensanoJ. Van Braekel Transversal & Applied Genomics, SciensanoM. Delvoye Transversal & Applied Genomics, SciensanoS. Hoffman Transversal & Applied Genomics, SciensanoL. Lefèvre Transversal & Applied Genomics, SciensanoN. Roosens Transversal & Applied Genomics, SciensanoS. De Keersmaecker Transversal & Applied Genomics, SciensanoK. Vanneste Transversal & Applied Genomics, Sciensano
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P 7.17
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P 7.18
|
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P 7.19
|
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P 7.20
|
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P 7.21
|
Protein Complex Similarity Based on Weisfeiler-Lehman Labeling
Poster
Others
B. Stöcker
Presenter
Genome Informatics and Algorithms for Reproducible Bioinformatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, EssenT. Schäfer Computer Science XI, TU Dortmund UniversityP. Mutzel Computer Science XI, TU Dortmund UniversityJ. Köster Genome Informatics and Algorithms for Reproducible Bioinformatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen; Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston MA 02215, USAN. Kriege Computer Science XI, TU Dortmund UniversityS. Rahmann Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen; Computer Science XI, TU Dortmund University, Dortmund
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P 7.22
|
C-Jun drives melanoma progression in PTEN wild type melanoma cells
Poster
Others
M. Kappelmann-Fenzl
Presenter
Deggendorf Institute of Technology; Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergC. Gebhard Department of Internal Medicine III, University Hospital Regensburg; Regensburg Center for Interventional Immunology (RCI), c/o University Hospital RegensburgA. Matthies Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergS. Kuphal Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergM. Rehli Department of Internal Medicine III, University Hospital Regensburg; Regensburg Center for Interventional Immunology (RCI), c/o University Hospital RegensburgA. Bosserhoff Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-Nürnberg; Comprehensive Cancer Center (CCC)-EMN
|
P 7.23
|
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P 7.24
|
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P 7.25
|
Curatopes Melanoma: A database of T cell epitopes from overly expressed proteins in metastatic cutaneous melanoma
Poster
Others
C. Lischer
Presenter
Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenM. Eberhardt Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenT. Jaitly Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenC. Schinzel Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenN. Schaft Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenJ. Dörrie Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenG. Schuler Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenJ. Vera Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum Erlangen
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P 7.26
|
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P 7.27
|
PIC – a basic and extendable Petri net App for Cytoscape
Poster
Others
M. Gehrmann
Presenter
Molecular Bioinformatics, Goethe-UniversityM. Kirchner
Presenter
Molecular Bioinformatics, Goethe-UniversityJ. Rieser Molecular Bioinformatics, Goethe-UniversityJ. Ackermann Molecular Bioinformatics, Goethe-UniversityI. Koch Molecular Bioinformatics, Goethe-University
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P 7.28
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P 7.29
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P 7.30
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P 7.31
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P 7.32
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P 7.33
|
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P 7.34
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P 7.35
|
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P 7.37
|
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P 7.38
|
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P 7.39
|
Can exosomal RNA serve as biomarker for renal clear cell carcinoma?
Poster
Others
K. Grützmann
Presenter
Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; German Cancer Consortium (DKTK), Heidelberg; German Cancer Research Center (DKFZ), HeidelbergS. Füssel Department of Urology, University Hospital Carl Gustav Carus, Dresden University of TechnologyA. Krüger Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; German Cancer Consortium (DKTK), Heidelberg; German Cancer Research Center (DKFZ), HeidelbergA. Lohse-Fischer Department of Urology, University Hospital Carl Gustav Carus, Dresden University of TechnologyF. Zakrzewski Institute for Pathology, University Hospital Carl Gustav Carus Dresden; Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) DresdenB. Klink Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; Institute for Clinical Genetics, University Hospital Carl Gustav Carus Dresden; Faculty of Medicine Carl Gustav Carus, Technische Universität DresdenD. Aust Institute for Pathology, University Hospital Carl Gustav Carus Dresden; Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) DresdenE. Schröck Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; Institute for Clinical Genetics, University Hospital Carl Gustav Carus Dresden; Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden
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P 7.40
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P 7.41
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P 7.42
|
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