List of posters

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Title
P 1.01
Inference of DNA copy number alterations from single-cell RNA sequencing data using transcriptional regulatory networks
Poster RNA
R. Johnen Presenter CECADL. Nagel CECADA. Leote CECADM. Lentzen CECADA. Beyer CECAD
P 1.02
Gene expression and TMB of MSI-H and POLE mutation by colorectal cancer
Poster RNA
K. Kluck Presenter Institute of Pathology, University Hospital HeidelbergM. von Winterfeld Institute of Pathology, University Hospital HeidelbergM. Kirchner Institute of Pathology, University Hospital HeidelbergP. Schirmacher Institute of Pathology, University Hospital HeidelbergA. Stenzinger Institute of Pathology, University Hospital HeidelbergJ. Budczies Institute of Pathology, University Hospital Heidelberg
P 1.03
SPLICE-q: a Python tool for Genome-Wide Determination of Splicing Efficiency
Poster RNA
V. R. de Melo Costa Presenter Freie Universität BerlinJ. Pfeuffer Universität TübingenE. Ntini Max Planck Institute for Molecular Genetics and Freie Universität BerlinU. Oerom Aarhus UniversityR. Piro Freie Universität Berlin
P 1.04
Defined subsets of functional endogenous LINE-1 loci that mobilize in human tumors are activated and mobilized in human embryonic and induced pluripotent stem cell lines
Poster RNA
G. Schumann Paul-Ehrlich-InstitutJ. Duc Ecole Polytechnique Fédérale de LausanneM. Friedli Ecole Polytechnique Fédérale de LausanneL. Childs Presenter Paul-Ehrlich-InstitutU. Held Paul-Ehrlich-InstitutT. Kearns Paul-Ehrlich-InstitutT. Kaul Tulane UniversityP. Deininger Tulane UniversityD. Trono Ecole Polytechnique Fédérale de Lausanne
P 1.05
Identifying gene signatures: purely data-driven approaches in analysis of the transcriptomic data and its implementation in immunological analysis
Poster RNA
B. Liu Presenter German Center for Lung Research, partner site Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Hannover Medical SchoolP. Lindner Leibniz University of HannoverA. Jirmo Department of Pediatric Pneumology, Allergology and Neonatology, Hannover Medical SchoolU. Maus Division of Experimental Pneumology, Hannover Medical SchoolT. Illig Hannover Unified Biobank, Hannover Medical SchoolD. DeLuca German Center for Lung Research, partner site Biomedical Research in Endstage and Obstructive Lung Disease Hannover (BREATH), Hannover Medical School
P 1.06
Decoding Nanopore Signals with Neural Networks for Cell Type-Specific Expression Profiling
Poster RNA
T. Baar Presenter Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of CologneM. Ignarski Dept. II of Internal Medicine and Center for Molecular Medicine Cologne, University of CologneS. Dümcke Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of CologneI. Helmuth Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzJ. Hertler Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzM. Helm Institute of Pharmacy and Biochemistry, Johannes Gutenberg-University MainzR. Müller Dept. II of Internal Medicine and Center for Molecular Medicine Cologne, University of CologneA. Tresch Institute of Medical Statistics and Computational Biology IMSB, Faculty of Medicine, University of Cologne
P 1.07
Ribosome Profiling with Bayesian Predictions to Survey the Cardiac Landscape of Translation
Poster RNA
E. Boileau Presenter Heidelberg University HospitalC. Dieterich Heidelberg University Hospital
P 1.08
Circtools – a bioinformatics toolbox for circular RNAs
Poster RNA
T. Jakobi Presenter Heidelberg University HospitalA. Uvarovskii Heidelberg University HospitalC. Dieterich Heidelberg University Hospital
P 1.09
A combined computational pipeline to detect circular RNAs in human cancer cells under hypoxic stress
Poster RNA
A. Di Liddo Presenter Buchmann Institute for Molecular Life Sciences and Institute of Cell Biology and Neuroscience, Goethe UniversityC. Oliveira Freitas Machado Institute of Cell Biology and Neuroscience and Institute for Cardiovascular Regeneration, Goethe UniversityS. Fischer Department of Biology, Technical University DarmstadtS. Ebersberger Institute of Molecular Biology (IMB)A. Heumüller Institute for Cardiovascular Regeneration, Goethe UniversityJ. Weigand Department of Biology, Technical University DarmstadtM. Müller-McNicoll Institute of Cell Biology and Neuroscience, Goethe UniversityK. Zarnack Buchmann Institute for Molecular Life Sciences, Goethe University
P 1.10
Improving Subtype Classification of Non-Small Cell Lung Cancer by Independent Component Analysis
Poster RNA
T. Eveno Presenter Luxembourg Institute of HealthM. Chepeleva Belarus State UniversityT. Kaoma Luxembourg Institute of HealthA. Muller Luxembourg Institute of HealthF. Azuaje Luxembourg Institute of HealthP. Nazarov Luxembourg Institute of Health
P 1.11
The HEK-SeqOme – A comparison of multiple RNA-Seq libraries
Poster RNA
A. Muller Presenter Luxembourg Institute of HealthN. Nicot Luxembourg Institute of HealthE. Mommaerts Luxembourg Institute of HealthF. Azuaje Luxembourg Institute of HealthG. Dittmar Luxembourg Institute of Health
P 1.12
SilentMutations (SIM): a tool for analyzing long-range RNA-RNA interactions in viral genomes and structured RNAs
Poster RNA
D. Desirò Presenter Friedrich Schiller UniversityM. Hölzer Friedrich Schiller UniversityB. Ibrahim Friedrich Schiller UniversityM. Marz Friedrich Schiller University
P 1.13
Baltica: Benchmarking alternative splicing identification
Poster RNA
T. Britto-Borges Presenter Heidelberg University HospitalV. Boehm University of CologneJ. V. Gerbracht University of CologneN. H. Gehring University of CologneC. Dieterich Heidelberg University Hospital
P 1.14
Efficient algorithms for decoding whole-transcriptome MERFISH experiments
Poster RNA
T. Hartmann Presenter University of Duisburg-EssenS. Rahmann Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen
P 1.15
A Comprehensive Analysis of Antisense Transcription Across Tissue and Cancer Types
Poster RNA
J. Feichtinger Presenter Medical University of GrazR. McFarlane Bangor University
P 1.16
A comprehensive method protocol for annotation and integrated functional understanding of ncRNAs
Poster RNA
M. Fuchs Presenter Julius-Maximilians-Universität WürzburgM. Kunz Friedrich Alexander Universität Erlangen-NürnbergT. Dandekar Julius-Maximilians Universität Würzburg
P 1.17
Non-coding RNAs in podocyte disorders – taking glomerular disease beyond the coding genome
Poster RNA
S. Talyan Presenter University Hospital Heidelberg
P 2.01
Disentangling transcription factor binding site complexity
Poster Genomics
R. Eggeling Presenter Universität Tübingen
P 2.02
Multi-Omics Factor Analysis (MOFA): an unsupervised statistical framework to disentangle patient heterogeneity in multi-omics studies
Poster Genomics
R. Argelaguet Presenter European Bioinformatics Institute (EMBL-EBI)B. Velten European Molecular Biology Laboratory (EMBL)D. Arnol European Bioinformatics Institute (EMBL-EBI)S. Dietrich Heidelberg University HospitalT. Zenz Heidelberg University HospitalJ. Marioni Cancer Research UK Cambridge InstituteF. Buettner Helmholtz Zentrum München-German Research Center for Environmental HealthW. Huber European Molecular Biology Laboratory (EMBL)O. Stegle European Molecular Biology Laboratory (EMBL)
P 2.03
Bioinformatics pipeline to screen metagenomic data for novel natural products and quantify biosynthesis potential
Poster Genomics
S. Mantri Presenter University of TübingenH. Sales-Ortells University of TübingenT. Negri University of TübingenD. Huson University of TübingenN. Ziemert University of Tübingen
P 2.04
Statistical Problems in Gene-Based Testing and Possible Solutions
Poster Genomics
O. Cinar Presenter Maastricht UniversityW. Viechtbauer Maastricht University
P 2.05
The definition of open reading frame revisited
Poster Genomics
P. Sieber Presenter Department of Bioinformatics, Friedrich Schiller Universität JenaM. Platzer Leibniz Institute on Aging – Fritz Lipmann Institute (FLI)S. Schuster Department of Bioinformatics, Friedrich Schiller University Jena
P 2.06
Optimizing panel sequencing estimates for tumor mutational burden (TMB) measurement
Poster Genomics
J. Budczies Presenter Heidelberg University HospitalE. Rempel Heidelberg University HospitalK. Kluck Heidelberg University HospitalD. Kazdal Heidelberg University HospitalM. Allgäuer Heidelberg University HospitalV. Endris Heidelberg University HospitalP. Schirmacher Heidelberg University HospitalA. Stenzinger Heidelberg University Hospital
P 2.07
Galaxy for long-read ONT data analysis and public education
Poster Genomics
B. Batut Albert-Ludwigs-Universität FreiburgM. Miladi Albert-Ludwigs-Universität FreiburgS. Hiltemann Erasmus MCW. de Koning Erasmus MCB. Grüning Presenter Albert-Ludwigs-Universität Freiburg
P 2.08
MiCroM: A Comprehensive Pipeline for Gene Amplicon and Metagenomic Data Analysis
Poster Genomics
R. Bharti Presenter Bioinformatics, TUM Campus Straubing for Biotechnology and Sustainability,Weihenstephan-Triesdorf University of Applied Sciences, Straubing, GermanyD. Grimm Bioinformatics, TUM Campus Straubing for Biotechnology and Sustainability,Weihenstephan-Triesdorf University of Applied Sciences, Straubing, Germany
P 2.09
Gene Regulatory Networks Inference using Fuzzy Cognitive Maps by Improved Compressed Sensing Algorithm
Poster Genomics
A. Khanteymoori Albert-Ludwigs-UniversitätE. Papageorgiou Presenter University of ThessalyJ. Pirgazi Znajan UniversityN. Papandrianos University of ThessalyS. Mousavi University of Zanjan
P 2.10
Predicting Gene Expression from Histone Modifications Signals using Machine Learning Techniques in Galaxy
Poster Genomics
A. Khanteymoori Presenter Albert-Ludwigs-Universität FreiburgB. Grüning Albert-Ludwigs-Universität FreiburgA. Kumar Albert-Ludwigs-Universität Freiburg
P 2.11
ClinVAP: A Reporting strategy from variants to therapeutic targets
Poster Genomics
B. Sürün Presenter University of TübingenC. Schärfe University of TübingenM. Divine University of TübingenJ. Heinrich University of TübingenN. Toussaint ETH Zurich & Swiss Institute of BioinformaticsL. Zimmermann University of TübingenJ. Beha University Hospital TübingenO. Kohlbacher University of Tübingen
P 2.12
AMEN: a reproducible and reliable trimming, assembly and binning workflow.
Poster Genomics
C. Knauth Leibniz Institute of Baltic Sea ResearchJ. Werner Presenter Leibniz Institute of Baltic Sea Research
P 2.13
Comparing Alignment-Free Distances
Poster Genomics
F. Klötzl Presenter MPI for Evolutionary BiologyB. Haubold MPI for Evolutionary Biology
P 2.14
Phybema: An extensible software pipeline for the systematic and reproducible evaluation of distance based phylogenetic reconstruction methods
Poster Genomics
B. Päuker Presenter University of Hamburg, MIN-Fakultät, Center for BioinformaticsS. Kurtz University of Hamburg, MIN-Fakultät, Center for Bioinformatics
P 2.15
Application of stepwise Elastic Net regression (sENR) with pairwise interactions to improve interpretation of drug response prediction with multiple data types
Poster Genomics
N. Li Presenter German Cancer Research Center (DKFZ)R. Schefzik German Cancer Research Center (DKFZ)A. Goncalves German Cancer Research Center (DKFZ)
P 2.16
Surveying the Local Sequence Complexity in the Axolotl Genome
Poster Genomics
B. Haubold Presenter Max-Planck-Institute for Evolutionary Biology
P 2.17
Omics Profiling and integration: Deeper insight into Pancreatic Ductal Adenocarcinoma (PDAC) survival heterogeneity using integrative analyses of individual and global transcriptome based networks
Poster Genomics
A. Bhardwaj Presenter BIO3, GIGA Research, University of Liège, BelgiumC. Josse Laboratory of Human Genetics, GIGA Research, University Hospital (CHU), Liège, BelgiumC. Poulet Laboratory of Human Genetics, GIGA Research, University Hospital (CHU), Liège, BelgiumD. Van Daele Department of Gastro-enterology, University Hospital (CHU), Liège, BelgiumM. Chavez University of LiegeI. Struman GIGA-R Centre, Laboratory of Molecular Angiogenesis, Liège, BelgiumK. Van Steen BIO3, GIGA Research, University of Liège, Belgium
P 2.18
Phase-aware Neoantigen Prediction from Whole Exome and RNA Sequencing Data
Poster Genomics
J. Forster Presenter German Cancer Consortium (DKTK), Essen/DüsseldorfJ. Köster Genome Informatics and Algorithms for Reproducible Bioinformatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen
P 2.19
DeePaC: Predicting pathogenic potential of novel DNA with reverse-complement neural networks
Poster Genomics
J. Bartoszewicz Presenter Robert Koch Institute
P 2.20
A Novel Tool for Quantitative Measures of Genome-wide Cell-free DNA Fragmentation in Cancer Patients
Poster Genomics
P. Puranachot Presenter Division of Applied Bioinformatics, German Cancer Research Center (DKFZ)S. Dietz Division of Cancer Genome Research, German Cancer Research Center (DKFZ)H. Sültmann Division of Cancer Genome Research, German Cancer Research Center (DKFZ)B. Brors Division of Applied Bioinformatics, German Cancer Research Center (DKFZ)
P 2.21
The Statistical Stability of Consensus Independent Component Analysis for Patient Classification and Prediction of Survival
Poster Genomics
M. Chepeleva Presenter Luxembourg Institute of HealthT. Eveno Luxembourg Institute of HealthM. Yatskou Belarusian State UniversityP. Nazarov Luxembourg Institute of Health
P 2.22
Finding sequence motifs in ChIP-Seq data without peaks
Poster Genomics
M. Menzel Presenter Technische Hochschule MitelhessenA. Gogol-Döring Technische Hochschule Mittelhessen
P 2.23
Determinants of transcription factor activity - resolving the riddle of absent expression correlation of transcription factors and their targets
Poster Genomics
A. Zaborowski Presenter Max Planck Institute of Molecular Plant PhysiologyD. Walther Max Planck Institute of Molecular Plant Physiology
P 2.25
Identification of novel intronic cis-regulatory motifs in Arabidopsis thaliana.
Poster Genomics
G. Back Presenter Max Planck Institute of Molecular Plant PhysiologyD. Walther Max Planck Institute of Molecular Plant Physiology
P 2.26
Signature refitting with decompTumor2Sig: identification of active mutational processes in individual tumor samples
Poster Genomics
S. Krüger Freie Universität BerlinR. Piro Presenter Freie Universität Berlin
P 2.27
Drug response prediction in primary blood tumor cells using models trained on cell line data
Poster Genomics
R. Kurilov Presenter German Cancer Research Center (DKFZ)B. Brors German Cancer Research Center (DKFZ)
P 2.28
Methylomes and transcriptomes of the adult neural stem cell lineage suggest a role of DNA-methylation in cell type-specific gene expression
Poster Genomics
L. Kremer Presenter DKFZ & ZMBH HeidelbergS. Dehler DKFZ HeidelbergS. Cerrizuela DKFZ HeidelbergD. Weichenhan DKFZ HeidelbergA. Martin-Villalba DKFZ HeidelbergS. Anders ZMBH Heidelberg
P 2.29
Characterizing Ambiguity in Cancer Evolutionary Histories
Poster Genomics
L. Sundermann Presenter University of TorontoJ. Wintersinger University of TorontoG. Rätsch ETH ZürichJ. Stoye Bielefeld UniversityQ. Morris University of Toronto
P 2.30
Structure-Informed Variant Prioritization in Personalized Oncology
Poster Genomics
S. Wong Presenter DKFZ HeidelbergB. Brors German Cancer Research Center (DKFZ)
P 3.01
Target-driven gene expression signatures and pre-clinical drug sensitivity models for predicting patient response to chemotherapy
Poster Informatic
T. Kaoma Presenter Luxembourg Institute of HealthJ. Sarry Centre de Recherches en Cancérologie de ToulouseF. Azuaje Luxembourg Institute of Health
P 3.02
Improving characterisation of cancer patients by consensus independent component analysis of tumour transcriptomes
Poster Informatic
P. Nazarov Presenter Luxembourg Institute of HealthT. Eveno Luxembourg Institute of HealthM. Chepeleva Belarus State UniversityT. Kaoma Luxembourg Institute of HealthA. Muller Luxembourg Institute of HealthF. Azuaje Luxembourg Institute of Health
P 3.03
Automated cell type gating on Chip cytometry-data
Poster Informatic
S. Gaedcke Presenter Medizinische Hochschule Hannover (MHH)A. Jirmo Medizinische Hochschule Hannover (MHH)D. DeLuca Medizinische Hochschule Hannover (MHH)C. Happle Medizinische Hochschule Hannover (MHH)A. Dittrich Medizinische Hochschule Hannover (MHH)G. Hansen Medizinische Hochschule Hannover (MHH)
P 3.04
A deep learning approach to short antimicrobial peptide prediction
Poster Informatic
P. Bhadra Presenter Saarland UniversityS. Siu University of Macau
P 3.05
Methylation analysis of combined drug application in leukemia cell lines
Poster Informatic
Y. Gladbach Presenter Ruprecht-Karls-Universität Heidelberg
P 3.06
Chemokine signaling in different cancer subtypes
Poster Informatic
A. Aleksandrov Presenter Division of Applied Bioinformatics, German Cancer Research Center (DKFZ)
P 3.07
Analysis of methylation profiles in hepatic cancer
Poster Informatic
E. Rempel Presenter Universität Heidelberg
P 5.01
P 5.02
A new approach for the automatic detection of follicular regions in Actin-stained whole slide images of the human lymph node using shock filter
Poster Imaging
P. Wurzel Presenter Goethe Universität Frankfurt am MainH. Schäfer Goethe Universität Frankfurt am MainJ. Ackermann Goethe Universität Frankfurt am MainM. Hansmann Goethe Universität Frankfurt am MainI. Koch Goethe Universität Frankfurt am Main
P 6.01
Single-Cell RNA Sequencing Uncovers a Large-Oncosome-Signature in Medulloblastoma
Poster Single Cel
M. Interlandi Presenter Institute of Medical Informatics – University HospitalT. Albert Department of Pediatric Hematology and Oncology - University Children's HospitalK. Kerl Department of Pediatric Hematology and Oncology - University Children's HospitalM. Dugas Institute of Medical Informatics – University Hospital
P 6.02
GCB2019: Single-cell RNA analysis in Galaxy
Poster Single Cel
M. Tekman Presenter Albert-Ludwigs-Universität Freiburg, Institut für InformatikB. Batut Albert-Ludwigs-Universität Freiburg, Institut für InformatikB. Grüning Albert-Ludwigs-Universität Freiburg, Institut für Informatik
P 6.03
Comparative single cell transcriptomic analysis of the hematopoietic system between human and mouse
Poster Single Cel
S. Gao Presenter NHLBI/NIHZ. Wu NHLBI/NIHX. Feng NHLBI/NIHV. Dong NHLBI/NIHS. Kajigaya NHLBI/NIHN. Young NHLBI/NIH
P 6.04
Exploring gene expression landscape of DMBA-TPA induced skin carcinoma at the single cell level
Poster Single Cel
L. Penso Dolfin Presenter DKFZ HeidelbergM. Behm DKFZ HeidelbergD. Odom DKFZ HeidelbergM. Frye DKFZ HeidelbergA. Goncalves DKFZ Heidelberg
P 6.05
Biomarker Discovery with Robust Bagging Feature Selection
Poster Single Cel
G. Pileggi Presenter NEC Laboratories Europe GmbHB. Malone NEC Laboratories Europe GmbH
P 7.01
How to “appreci8” Variant Calling in NGS Data
Poster Others
S. Sandmann Westfälische Wilhelms-Universität Münster, Institut für Medizinische InformatikM. Dugas Westfälische Wilhelms-Universität Münster, Institut für Medizinische InformatikM. Interlandi Presenter Institute of Medical Informatics, Münster
P 7.02
Evaluation of Pipelines for Meta-Analysis of ChIP-seq Data
Poster Others
I. Muchsin Presenter University of Veterinary Medicine HannoverM. Kohls University of Veterinary Medicine HannoverK. Jung University of Veterinary Medicine Hannover
P 7.03
ExtraCytoplasmic Function (ECF) sigma factor classification: from phylogenesis to protein regulation
Poster Others
D. Casas Pastor Presenter LOEWE-Zentrum für Synthetische Mikrobiologie (Synmikro)S. Chandrashekar Iyer Max Planck Institute for Terrestrial MicrobiologyR. Müller Justus-Liebig-Universität GießenT. Mascher Technische Universität DresdenA. Goesmann Justus-Liebig-Universität GießenS. Ringgaard Max Planck Institute for Terrestrial MicrobiologyG. Fritz LOEWE-Zentrum für Synthetische Mikrobiologie (Synmikro)
P 7.04
P 7.05
HiCExplorer 3: A toolbox for Hi-C data analysis
Poster Others
J. Wolff Presenter Albert-Ludwigs-University FreiburgL. Rabbani Max-Planck-Institut für Immunbiologie und EpigenetikG. Richard Max-Planck-Institut für Immunbiologie und EpigenetikT. Manke Max-Planck-Institut für Immunbiologie und EpigenetikA. Akhtar Max-Planck-Institut für Immunbiologie und EpigenetikR. Backofen Albert-Ludwigs-University FreiburgF. Ramirez Target Discovery Research, Boehringer Ingelheim Pharma GmbH & Co. KGB. Gruening Albert-Ludwigs-University Freiburg
P 7.06
A novel method for achieving an optimal classification of the proteinogenic amino acids
Poster Others
A. Then Presenter FSU JenaK. Mácha FSU JenaB. Ibrahim FSU JenaS. Schuster FSU Jena
P 7.07
FastQuality – A machine learning application to assess the quality of early stage sequencing data (fastq files)
Poster Others
S. Albrecht Presenter Johannes Gutenberg-UniversitätM. Andrade-Navarro Johannes Gutenberg-UniversitätJ. Fontaine Johannes Gutenberg-Universität
P 7.08
Predicting the Presence of Redox-Modified Cysteines in Proteins using Machine Learning and Statistical Methods
Poster Others
M. Keßler Presenter Goethe-Universität Frankfurt am MainI. Wittig Goethe Universität Frankfurt am MainI. Koch Goethe Universität Frankfurt am Main
P 7.09
Predicting the Presence of Redox-Modified Cysteines in Proteins using Machine Learning and Statistical Methods
Poster Others
M. Keßler Presenter Goethe-Universität Frankfurt am MainI. Wittig Goethe Universität Frankfurt am MainI. Koch Goethe Universität Frankfurt am Main
P 7.10
Pathway Activation Prediction using Signed Directed Random Walk with Restart
Poster Others
J. Kreis Presenter University HeidelbergD. Juraeva Merck Healthcare KGaAE. Staub Merck Healthcare KGaAB. Brors Division of Applied Bioinformatics, German Cancer Research Center (DKFZ)
P 7.11
autobiograML: towards automated machine learning in protein function prediction
Poster Others
M. Burdukiewicz Warsaw University of TechnologyD. Rafacz Warsaw University of TechnologyK. Sidorczuk University of WrocławS. Rödiger Presenter Brandenburg University of Technology Cottbus - SenftenbergP. Gagat University of Wrocław
P 7.12
P 7.13
Comprehensive analysis of allele-specific methylation in amplicons with amplikyzer2
Poster Others
S. Rahmann Presenter University Hospital Essen, University of Duisburg-EssenM. Bargull University Hospital Essen, University of Duisburg-EssenJ. Beygo University Hospital Essen, University of Duisburg-EssenB. Horsthemke University Hospital Essen, University of Duisburg-Essen
P 7.14
Fast homology search with COMER
Poster Others
M. Margelevičius Presenter Vilnius University
P 7.15
A comparative study of MiSeq and MinION for the classification of 16S rRNA gene sequences
Poster Others
R. Winand Presenter Transversal & Applied Genomics, SciensanoB. Bogaerts Transversal & Applied Genomics, SciensanoQ. Fu Transversal & Applied Genomics, SciensanoJ. Van Braekel Transversal & Applied Genomics, SciensanoM. Delvoye Transversal & Applied Genomics, SciensanoS. Hoffman Transversal & Applied Genomics, SciensanoL. Lefèvre Transversal & Applied Genomics, SciensanoN. Roosens Transversal & Applied Genomics, SciensanoS. De Keersmaecker Transversal & Applied Genomics, SciensanoK. Vanneste Transversal & Applied Genomics, Sciensano
P 7.17
NJ-networks, turning greedy into all possibilities
Poster Others
A. Hoenen Presenter Goethe Universität Frankfurt a.M.
P 7.18
A curated knowledgebase on endocrine disrupting chemicals enabling mechanistic insights into systems-level perturbations upon exposure
Poster Others
J. Ravichandran Presenter The Institute of Mathematical Sciences (IMSc), Homi Bhabha National InstituteB. Karthikeyan The Institute of Mathematical Sciences (IMSc), Homi Bhabha National InstituteK. Mohanraj The Institute of Mathematical Sciences (IMSc), Homi Bhabha National InstituteR. Vivek-Ananth The Institute of Mathematical Sciences (IMSc), Homi Bhabha National InstituteA. Samal The Institute of Mathematical Sciences (IMSc), Homi Bhabha National Institute
P 7.19
Comparison of pathway and GO-network of Salmonella infected HeLa cells.
Poster Others
J. Rieser Presenter Goethe UniversitätJ. Ackermann Goethe UniversitätI. Koch Goethe Universität
P 7.20
Topological description of large protein complexes based on cryo-EM data using graph theory
Poster Others
J. Wolf Presenter Goethe UniversityM. Keßler Goethe UniversityJ. Ackermann Goethe UniversityI. Koch Goethe University
P 7.21
Protein Complex Similarity Based on Weisfeiler-Lehman Labeling
Poster Others
B. Stöcker Presenter Genome Informatics and Algorithms for Reproducible Bioinformatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, EssenT. Schäfer Computer Science XI, TU Dortmund UniversityP. Mutzel Computer Science XI, TU Dortmund UniversityJ. Köster Genome Informatics and Algorithms for Reproducible Bioinformatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen; Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston MA 02215, USAN. Kriege Computer Science XI, TU Dortmund UniversityS. Rahmann Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen, Essen; Computer Science XI, TU Dortmund University, Dortmund
P 7.22
C-Jun drives melanoma progression in PTEN wild type melanoma cells
Poster Others
M. Kappelmann-Fenzl Presenter Deggendorf Institute of Technology; Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergC. Gebhard Department of Internal Medicine III, University Hospital Regensburg; Regensburg Center for Interventional Immunology (RCI), c/o University Hospital RegensburgA. Matthies Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergS. Kuphal Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-NürnbergM. Rehli Department of Internal Medicine III, University Hospital Regensburg; Regensburg Center for Interventional Immunology (RCI), c/o University Hospital RegensburgA. Bosserhoff Institute of Biochemistry (Emil-Fischer Center), Friedrich-Alexander University Erlangen-Nürnberg; Comprehensive Cancer Center (CCC)-EMN
P 7.23
Deciphering the mechanism of drug resistance in Smoothened receptor: An in silico perspective of protein resistivity and specificity
Poster Others
N. Sinha Presenter CSIR- National Chemical Laboratory (NCL)S. Chowdhury CSIR- National Chemical Laboratory (NCL)D. Sarkar CSIR- National Chemical Laboratory (NCL)
P 7.24
Struo: a pipeline for building custom databases for common metagenome profilers
Poster Others
J. de la Cuesta-Zuluaga Presenter Max Planck Institute for Developmental BiologyR. Ley Max Planck Institute for Developmental BiologyN. Youngblut Max Planck Institute for Developmental Biology
P 7.25
Curatopes Melanoma: A database of T cell epitopes from overly expressed proteins in metastatic cutaneous melanoma
Poster Others
C. Lischer Presenter Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenM. Eberhardt Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenT. Jaitly Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenC. Schinzel Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenN. Schaft Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenJ. Dörrie Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenG. Schuler Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum ErlangenJ. Vera Friedrich-Alexander University Erlangen-Nürnberg and Universitätsklinikum Erlangen
P 7.26
Natrix: A snakemake-based workflow for the processing, clustering and taxonomic assignment of amplicon sequences
Poster Others
M. Welzel Heiderlab, Department of Mathematics and Computer Science, University of MarburgA. Lange Bioinformatics and Computational Biophysics, University of Duisburg-EssenD. Heider Heiderlab, Department of Mathematics and Computer Science, University of MarburgM. Jensen Biodiversity, University of Duisburg-EssenJ. Boenigk Biodiversity, University of Duisburg-EssenD. Beisser Presenter University of Duisburg-Essen
P 7.27
PIC – a basic and extendable Petri net App for Cytoscape
Poster Others
M. Gehrmann Presenter Molecular Bioinformatics, Goethe-UniversityM. Kirchner Presenter Molecular Bioinformatics, Goethe-UniversityJ. Rieser Molecular Bioinformatics, Goethe-UniversityJ. Ackermann Molecular Bioinformatics, Goethe-UniversityI. Koch Molecular Bioinformatics, Goethe-University
P 7.28
Translated ORF prediction in bacteria - A comparison of available machine learning approaches
Poster Others
C. Huptas Presenter Technische Universitaet MuenchenZ. Ardern Technische Universitaet MuenchenS. Scherer Technische Universitaet Muenchen
P 7.29
metagenomic read classification with Deep Learning
Poster Others
F. Mock Presenter Friedrich Schiller Universität JenaA. Viehweger Friedrich Schiller Universität Jena
P 7.30
PTKTool: Mass spectrometry-based quality control system by reference peptides
Poster Others
S. Kim Presenter Luxembourg Institute of HealthA. Lesur Luxembourg Institute of HealthF. Azuaje Luxembourg Institute of HealthP. Nazarov Luxembourg Institute of HealthG. Dittmar Luxembourg Institute of Health
P 7.31
A Novel in Silico Precision Medicine Modelling Tool to Understand Tumor-associated Pathways and Molecular Treatment Decisions
Poster Others
M. Kunz Presenter Friedrich Alexander Universität Erlangen-Nürnberg
P 7.32
Data mining and machine learning approaches to investigate the biological roles of established biomarkers and their related cancer drivers
Poster Others
R. Sheibani Tezerji Presenter Ludwig Boltzmann Institute Applied DiagnosticsG. Egger Ludwig Boltzmann Institute Applied Diagnostics and Medical University of Vienna
P 7.33
Substrate prediction for membrane transporters by machine learning
Poster Others
A. Denger Presenter Saarland UniversityV. Helms Saarland University
P 7.34
A multipurpose web service for protein analysis based on the remote homology search method COMER running on GPU
Poster Others
J. Dapkunas Presenter Vilnius UniversityM. Margelevičius Vilnius University
P 7.35
Analysis of Differential Interactome in Colorectal Adenocarcinoma to Identify Candidate Biomarkers and Therapeutics
Poster Others
H. Beklen Presenter MARMARA UNIVERSITYG. Gulfidan MARMARA UNIVERSITYB. Turanli Istanbul Medeniyet UniversityP. Ozbek Sarica MARMARA UNIVERSITYK. Arga MARMARA UNIVERSITY
P 7.37
Cost-optimal assignment of elements in genome-scale multi-way bucketed Cuckoo hash tables
Poster Others
J. Zentgraf Presenter TU Dortmund UniversityS. Rahmann Genome Informatics, Institute of Human Genetics, University Hospital Essen, University of Duisburg-Essen
P 7.38
Of gene expression and cell division time – a mathematical framework for advanced differential gene expression and data analysis
Poster Others
K. Baum Presenter Max Delbrück Center for Molecular MedicineJ. Schuchhardt MicroDiscovery GmbHJ. Wolf Max Delbrück Center for Molecular MedicineD. Busse Max Delbrück Center for Molecular Medicine
P 7.39
Can exosomal RNA serve as biomarker for renal clear cell carcinoma?
Poster Others
K. Grützmann Presenter Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; German Cancer Consortium (DKTK), Heidelberg; German Cancer Research Center (DKFZ), HeidelbergS. Füssel Department of Urology, University Hospital Carl Gustav Carus, Dresden University of TechnologyA. Krüger Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; German Cancer Consortium (DKTK), Heidelberg; German Cancer Research Center (DKFZ), HeidelbergA. Lohse-Fischer Department of Urology, University Hospital Carl Gustav Carus, Dresden University of TechnologyF. Zakrzewski Institute for Pathology, University Hospital Carl Gustav Carus Dresden; Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) DresdenB. Klink Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; Institute for Clinical Genetics, University Hospital Carl Gustav Carus Dresden; Faculty of Medicine Carl Gustav Carus, Technische Universität DresdenD. Aust Institute for Pathology, University Hospital Carl Gustav Carus Dresden; Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) DresdenE. Schröck Core Unit for Molecular Tumor Diagnostics (CMTD) at the National Center for Tumor Diseases (NCT) Dresden; Institute for Clinical Genetics, University Hospital Carl Gustav Carus Dresden; Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden
P 7.40
Impact of abnormal feeding and rearing conditions on gut microbiome composition in piglets
Poster Others
V. Belik Presenter R. Pieper German Federal Institute for Risk Assessment
P 7.41
Deconvolution of methylation data identifies immunological component in sarcomas
Poster Others
M. Simon Presenter German Cancer Research Center (DKFZ)S. Mughal German Cancer Research Center (DKFZ)B. Brors German Cancer Research Center (DKFZ)S. Fröhling National Center for Tumor Diseases (NCT)C. Imbusch German Cancer Research Center (DKFZ)
P 7.42
Germline Alteration Detection Using a Parents-child Trio Bioinformatics Analysis Pipeline
Poster Others
L. Yasin Presenter Heinrich Heine Universität Düsseldorf